DNA - PMC - NCBI

Pengfei Zhan, Andreas Peil, Qiao Jiang, Dongfang Wang, Shikufa Mousavi, Qiancheng Xiong, Qi Shen, Yingxu Shang, Baoquan Ding, Chenxiang Lin, Yonggang Ke, Na Liu

Chem Rev. 2023 Apr 12; 123(7): 3976–4050. Published online 2023 Mar 29. doi: 10.1021/acs.chemrev.3c00028

PMCID:: PMC10103138

Article PDF–63M

Select item 91780124.

DNA-PK_cs-dependent phosphorylation of RECQL4 promotes NHEJ by stabilizing the NHEJ machinery at DNA double-strand breaks

Huiming Lu, Junhong Guan, Shih-Ya Wang, Guo-Min Li, Vilhelm A Bohr, Anthony J Davis

Nucleic Acids Res. 2022 Jun 10; 50(10): 5635–5651. Published online 2022 May 17. doi: 10.1093/nar/gkac375

PMCID:: PMC9178012

Article PDF–10M

Select item 68683585.

Poly(ADP-ribose)-dependent chromatin unfolding facilitates the association of DNA-binding proteins with DNA at sites of damage

Rebecca Smith, Théo Lebeaupin, Szilvia Juhász, Catherine Chapuis, Ostiane D’Augustin, Stéphanie Dutertre, Peter Burkovics, Christian Biertümpfel, Gyula Timinszky, Sébastien Huet

Nucleic Acids Res. 2019 Dec 2; 47(21): 11250–11267. Published online 2019 Sep 30. doi: 10.1093/nar/gkz820

PMCID:: PMC6868358

Article PDF–7.7M

Select item 98902316.

Condensin pinches a short negatively supercoiled DNA loop during each round of ATP usage

Belén Martínez‐García, Sílvia Dyson, Joana Segura, Alba Ayats, Erin E Cutts, Pilar Gutierrez‐Escribano, Luís Aragón, Joaquim Roca

EMBO J. 2023 Feb; 42(3): e111913. Published online 2022 Dec 19. doi: 10.15252/embj.2022111913

PMCID:: PMC9890231

Article PDF–6.7M

Select item 57378667.

CgII cleaves DNA using a mechanism distinct from other ATP-dependent restriction endonucleases

Paulius Toliusis, Mindaugas Zaremba, Arunas Silanskas, Mark D. Szczelkun, Virginijus Siksnys

Nucleic Acids Res. 2017 Aug 21; 45(14): 8435–8447. Published online 2017 Jul 7. doi: 10.1093/nar/gkx580

PMCID:: PMC5737866

Article PDF–3.4M

Select item 105294538.

Structures of 9-1-1 DNA checkpoint clamp loading at gaps from start to finish and ramification on biology

Fengwei Zheng, Roxana E. Georgescu, Nina Y. Yao, Michael E. O’Donnell, Huilin Li

Cell Rep. Author manuscript; available in PMC 2023 Sep 27.

Published in final edited form as: Cell Rep. 2023 Jul 25; 42(7): 112694. Published online 2023 Jun 30. doi: 10.1016/j.celrep.2023.112694

PMCID:: PMC10529453

Article PDF–2.6M

Select item 102781669.

Building Large DNA Bundles via Controlled Hierarchical Assembly of DNA Tubes

Yunlong Zhang, Donglei Yang, Pengfei Wang, Yonggang Ke

ACS Nano. 2023 Jun 13; 17(11): 10486–10495. Published online 2023 May 19. doi: 10.1021/acsnano.3c01342

PMCID:: PMC10278166

Article PDF–2.8M

Select item 975611110.

Stabilization of DNA fork junctions by Smc5/6 complexes revealed by single-molecule imaging

Nicoleta-Loredana Tanasie, Pilar Gutiérrez-Escribano, Sigrun Jaklin, Luis Aragon, Johannes Stigler

Cell Rep. 2022 Dec 6; 41(10): 111778. Published online 2022 Dec 6. doi: 10.1016/j.celrep.2022.111778

PMCID:: PMC9756111

Article

Select item 850195011.

TARG1 protects against toxic DNA ADP-ribosylation

Callum Tromans-Coia, Andrea Sanchi, Giuliana K Moeller, Gyula Timinszky, Massimo Lopes, Ivan Ahel

Nucleic Acids Res. 2021 Oct 11; 49(18): 10477–10492. Published online 2021 Sep 11. doi: 10.1093/nar/gkab771

PMCID:: PMC8501950

Article PDF–4.5M

Select item 1041368012.

Cryo-EM visualization of DNA-PKcs structural intermediates in NHEJ

Siyu Chen, Alex Vogt, Linda Lee, Tasmin Naila, Ryan McKeown, Alan E Tomkinson, Susan P Lees-Miller, Yuan He

Sci Adv. 2023 Jun 2; 9(22): eadg2838. Published online 2023 May 31. doi: 10.1126/sciadv.adg2838

PMCID:: PMC10413680

Article PDF–1.5M

Select item 1005225813.

A linear SARS-CoV-2 DNA vaccine candidate reduces virus shedding in ferrets

Mathias Martins, Gabriela M. do Nascimento, Antonella Conforti, Jessica C. G. Noll, Joseph A. Impellizeri, Elisa Sanchez, Bettina Wagner, Lucia Lione, Erika Salvatori, Eleonora Pinto, Mirco Compagnone, Brian Viscount, James Hayward, Clay Shorrock, Luigi Aurisicchio, Diego G. Diel

Arch Virol. 2023; 168(4): 124. Published online 2023 Mar 29. doi: 10.1007/s00705-023-05746-1

PMCID:: PMC10052258

Article PDF–1.3M

Select item 554944014.

What Combined Measurements From Structures and Imaging Tell Us About DNA Damage Responses

Chris A. Brosey, Zamal Ahmed, Susan P. Lees-Miller, John A. Tainer

Methods Enzymol. Author manuscript; available in PMC 2017 Aug 9.

Published in final edited form as: Methods Enzymol. 2017; 592: 417–455. Published online 2017 May 29. doi: 10.1016/bs.mie.2017.04.005

PMCID:: PMC5549440

Article PDF–1.4M

Select item 964350315.

Infrared nanospectroscopic imaging of DNA molecules on mica surface

Irma Custovic, Nicolas Pocholle, Eric Bourillot, Eric Lesniewska, Olivier Piétrement

Sci Rep. 2022; 12: 18972. Published online 2022 Nov 8. doi: 10.1038/s41598-022-23637-4

PMCID:: PMC9643503

Article PDF–2.8M

Select item 772021316.

Structure of eukaryotic DNA polymerase δ bound to the PCNA clamp while encircling DNA

Fengwei Zheng, Roxana E. Georgescu, Huilin Li, Michael E. O’Donnell

Proc Natl Acad Sci U S A. 2020 Dec 1; 117(48): 30344–30353. Published online 2020 Nov 17. doi: 10.1073/pnas.2017637117

PMCID:: PMC7720213

Article PDF–2.9M

Select item 556890417.

DNA requirements for interaction of the C-terminal region of Ku80 with the DNA-dependent protein kinase catalytic subunit (DNA-PKcs)

Sarvan Kumar Radhakrishnan, Susan P. Lees-Miller

DNA Repair (Amst) Author manuscript; available in PMC 2018 Sep 1.

Published in final edited form as: DNA Repair (Amst). 2017 Sep; 57: 17–28. Published online 2017 Jun 9. doi: 10.1016/j.dnarep.2017.06.001

PMCID:: PMC5568904

Article PDF–696K

Select item 766958818.

Envisioning how the prototypic molecular machine TFIIH functions in transcription initiation and DNA repair

Susan E. Tsutakawa, Chi-Lin Tsai, Chunli Yan, Amer Bralić, Walter J. Chazin, Samir M. Hamdan, Orlando D. Schärer, Ivaylo Ivanov, John A. Tainer

DNA Repair (Amst) Author manuscript; available in PMC 2021 Dec 1.

Published in final edited form as: DNA Repair (Amst). 2020 Dec; 96: 102972. Published online 2020 Sep 17. doi: 10.1016/j.dnarep.2020.102972

PMCID:: PMC7669588

Article PDF–3.5M

Select item 736716719.

AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop

Nicole M Hoitsma, Amy M Whitaker, Emily C Beckwitt, Sunbok Jang, Pratul K Agarwal, Bennett Van Houten, Bret D Freudenthal

Nucleic Acids Res. 2020 Jul 27; 48(13): 7345–7355. Published online 2020 Jun 15. doi: 10.1093/nar/gkaa496

PMCID:: PMC7367167

Article PDF–2.9M

Select item 846160820.

Functional DNA–Polymer Conjugates

Colette J. Whitfield, Meizhou Zhang, Pia Winterwerber, Yuzhou Wu, David Y. W. Ng, Tanja Weil

Chem Rev. 2021 Sep 22; 121(18): 11030–11084. Published online 2021 Mar 19. doi: 10.1021/acs.chemrev.0c01074

PMCID:: PMC8461608

Article PDF–23M

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